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Frequency of the Bc-REP and designed primer sequences in five reported genomes of the B. cereus group a

Journal:

Article Title: Fingerprinting of Bacillus thuringiensis Type Strains and Isolates by Using Bacillus cereus Group-Specific Repetitive Extragenic Palindromic Sequence-Based PCR Analysis

doi: 10.1128/AEM.71.3.1346-1355.2005

Figure Lengend Snippet: Frequency of the Bc-REP and designed primer sequences in five reported genomes of the B. cereus group a

Article Snippet: No further significant matches were found in all the genomes and nucleotide sequences available at the EMBL and NCBI gene banks, including the poorly sequenced B. mycoides (see below). table ft1 table-wrap mode="anchored" t5 TABLE 3. caption a7 Frequency Genome Bc1 Bc2 Bc3 Ba1 Ba2 Bt Bc-REP 100% 28 58 15 14 14 15 Bc-REP 96% 24 18 6 6 6 8 Direct 89 94 32 28 28 33 Reverse 37 71 20 18 18 19 Open in a separate window a Bc1, B. cereus ATCC 14579 genome (NC 004722.1); Bc2, B. cereus ATCC 10987 genome (NC 003909.8); Bc3, B. cereus ZK genome (NC 006274); Ba1, B. anthracis strain Ames genome (NC 003997.3); Ba2, B. anthracis strain Sterne genome (NC 005945.1); Bt, B. thuringiensis strain 97.27 genome (NC 005957.1); Bc-REP 100%, frequency of sequences showing 100% homology with Bc-REP; Bc-REP 96%, frequency of sequences showing 96% homology with Bc-REP; Direct, frequency of sequences showing 100% homology with the designed direct primer; Reverse, frequency of sequences showing 100% homology with the designed reverse primer.

Techniques: